Chromosome 1 BAC contigs

We are using genetically mapped probes and a reiterative hybridization methodology using overlapping probes (YACs, BACs, YAC and BAC ends, genetic markers)
to construct hybridization based maps of regions of
Arabidopsis thaliana Chromosome one.

Clones within the contigs are selected for end-sequencing to determine minimally overlapping tiling paths for genome sequencing. Our reiterative hybridization approach allows an interpretation of clone order within a contig, and these interpretations are shown below.

How to "read" the contigs

IGF contigs

To download the
  • text or
  • binary version of the hybridization data,
    hold the mouse button down until the pop-up menu appears and select "Save as".

    The binary version includes text enhancements to make viewing somewhat easier and is a Excel 5.0 file.

  • You can also view the unanchored contigs.


    TAMU contigs

  • text or
  • binary version of the hybridization data,
    hold the mouse button down until the pop-up menu appears and select "Save as".

    The binary version includes text enhancements to make viewing somewhat easier and is a Excel 5.0 file.





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    ATGC June 30,1999

    E-Mail Address: atgc@atgenome.bio.upenn.edu