CODE At4g25520 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr4 TITL AT4G25520.1 CDS gene_syn M7J2.110, M7J2_110, SEUSS-like 1, SLK1 gene SLK1 go_process embryo development|GO:0009790|20007451|IMP go_process gynoecium development|GO:0048467|20007451|IMP go_process ovule development|GO:0048481|20007451|IMP go_function transcription regulator activity|GO:0030528||ISS product SEUSS-like 1 note SEUSS-like 1 (SLK1); BEST Arabidopsis thaliana protein match is: SEUSS-like 3 (TAIR:AT4G25515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G25520.1p transcript_id AT4G25520.1 protein_id AT4G25520.1p transcript_id AT4G25520.1 COOR C/13032450-13033351,13033522-13033591,13033674-13033767,13033860-13033960,13034222-13034290,13034392-13034606,13034767-13034815,13034981-13035112,13035189-13035803 HITS ES176738 [GenBank] TYPE ESTs EVAL 2e-31 LOCN 300-UTR3 COOR W/13032158-13032230 HITS BP795546 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR W/13032183-13032590 NOTE CD531816 HITS RAFL07-65-F11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 0.0 LOCN Exon COOR C/13032183-13032590 HITS RAFL07-65-F11 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.38 LOCN Exon COOR C/13032183-13032312,13032312-13033351,13033522-13033591,13033674-13033767,13033860-13033960,13034222-13034290,13034392-13034606,13034767-13034815,13034981-13035112,13035189-13035903,13036111-13036211 HITS CF652680 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/13032190-13032969 NOTE AV547593 AV546734 CB261006 AI992463 HITS AV546156 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR W/13032378-13032973 NOTE ES134185 EL287466 HITS U66746 [SALK] [About & Citation] [NCBI] [Order from ABRC] TYPE Salk pUni Clone EVAL 99.96 LOCN Exon COOR C/13032450-13033351,13033522-13033591,13033674-13033767,13033860-13033960,13034222-13034290,13034392-13034606,13034767-13034815,13034981-13035112,13035189-13035803 NOTE BT012580 HITS G66746 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 99.96 LOCN Exon COOR C/13032450-13033351,13033522-13033591,13033674-13033767,13033860-13033960,13034222-13034290,13034392-13034606,13034767-13034815,13034981-13035112,13035189-13035803 NOTE U66746 BT012580 pENTR_Sfi HITS GATCACAGACCATGATT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/13032500-13032516 NOTE 72 30 18 17 7 3 16 19 14 17 2 0 19 21 2 72 86 HITS 245237_at [gAtlas] TYPE Affy Probes EVAL 0.0 LOCN Exon COOR C/13032531-13033022 HITS EH937890 [GenBank] TYPE ESTs EVAL 7e-50 LOCN Exon COOR W/13032909-13033021 HITS AV563671 [GenBank] TYPE ESTs EVAL 7e-53 LOCN Exon COOR C/13033314-13033351,13033521-13033591,13033674-13033766,13033859-13033963,13034225-13034271 HITS GATCTGATGAATTTCAC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/13033548-13033564 NOTE 0 0 0 0 0 2 5 5 1 0 0 0 0 0 0 3 18 HITS CK119659 [GenBank] TYPE ESTs EVAL e-119 LOCN Exon COOR C/13033914-13033958,13034220-13034290,13034392-13034607,13034768-13034814,13034980-13035112,13035189-13035222 HITS ASRP207799 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Exon COOR C/13033936-13033956 HITS EL120262 [GenBank] TYPE ESTs EVAL 1e-26 LOCN Exon COOR C/13035053-13035112,13035189-13035223 HITS ASRP210912 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Intron COOR C/13035113-13035134 HITS CB257697 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/13035260-13035926 NOTE EL994255 HITS W43814 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/13035640-13036146 HITS GATCCAAGAATTACAAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR5 COOR W/13035986-13036002 NOTE 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 HITS EL178511 [GenBank] TYPE ESTs EVAL 3e-58 LOCN 1000-Promotor COOR W/13036159-13036271