CODE At4g25515 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr4 TITL AT4G25515.1 CDS gene_syn SEUSS-like 3, SLK3 gene SLK3 go_function transcription regulator activity|GO:0030528||ISS product SEUSS-like 3 note SEUSS-like 3 (SLK3); BEST Arabidopsis thaliana protein match is: SEUSS-like 1 (TAIR:AT4G25520.1); Has 4377 Blast hits to 3114 proteins in 231 species: Archae - 0; Bacteria - 84; Metazoa - 736; Fungi - 339; Plants - 190; Viruses - 30; Other Eukaryotes - 2998 (source: NCBI BLink). protein_id AT4G25515.1p transcript_id AT4G25515.1 protein_id AT4G25515.1p transcript_id AT4G25515.1 COOR W/13028219-13028749,13028832-13028963,13029129-13029177,13029352-13029566,13029701-13029769,13030031-13030131,13030266-13030359,13030445-13030514,13030667-13031463 HITS GATCCGAGTTCGAATCT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 1000-Promotor COOR C/13027345-13027361 NOTE 0 0 4 0 0 8 6 0 0 0 0 0 0 0 1 3 0 HITS GATCACTTTTATTGTCG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 1000-Promotor COOR W/13027358-13027374 NOTE 49 210 65 156 80 10 114 158 56 49 72 23 48 15 0 60 27 HITS CATGTAATGCTTTC [About SAGE] TYPE SAGE Target EVAL 100 LOCN 1000-Promotor COOR W/13027444-13027457 HITS 254071_at [gAtlas] TYPE Affy Probes EVAL e-179 LOCN 300-UTR5 COOR C/13027455-13027501,13027646-13027962 HITS GATCCAGGCAGGTTAAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/13028288-13028304 NOTE 0 0 0 0 0 0 0 4 0 0 0 0 0 0 1 0 0 HITS EH969486 [GenBank] TYPE ESTs EVAL 6e-50 LOCN Exon COOR C/13028422-13028520 NOTE EL136964 HITS AI992984 [GenBank] TYPE ESTs EVAL e-116 LOCN Exon COOR W/13028832-13028964,13029130-13029176,13029351-13029566,13029702-13029772 NOTE AA395586 HITS GATCTGATGAATTTCAC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/13030472-13030488 NOTE 0 0 0 0 0 2 5 5 1 0 0 0 0 0 0 3 18 HITS ASRP175443 [About ASRP sRNA] TYPE ASRP sRNA contig EVAL 100.00 LOCN Intron COOR C/13030544-13030567 HITS ES082838 [GenBank] TYPE ESTs EVAL 2e-46 LOCN Exon COOR C/13030713-13030805 HITS EL128652 [GenBank] TYPE ESTs EVAL 4e-38 LOCN Exon COOR W/13031082-13031160 HITS AV522148 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/13031242-13031799 NOTE AI100521 HITS CATGATTTCTCAGA [About SAGE] TYPE SAGE Target EVAL 100 LOCN Exon COOR W/13031407-13031420