CLON TTTTCCTGTGAATTTGC[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr5
EVAL 100.00
COOR W/16264274-16264290
NOTE 1, +0 1 0 0 0

HITS At5g40605[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT5G40605.1 mRNA LOCN Exon COOR W/16259229-16264465 HITS At5g40605[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT5G40605 TE pseudo note Transposable element gene, non-LTR retrotransposon family (LINE), has a 1.7e-45 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus) LOCN Exon COOR W/16259229-16264465 CLON TTTTCCTGTGAATTTGC[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr4 EVAL 100.00 COOR C/13329067-13329083 NOTE 1, +0 1 0 0 0 HITS At4g26360[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26360.1 mRNA LOCN Exon COOR C/13328763-13332375 HITS At4g26360[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26360 TE pseudo gene_syn T25K17.1 note Transposable element gene, non-LTR retrotransposon family (LINE), has a 4.9e-40 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus) LOCN Exon COOR C/13328763-13332375 CLON TTTTCCTGTGAATTTGC[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr1 EVAL 100.00 COOR W/22357621-22357637 NOTE 1, +0 1 0 0 0 HITS At1g60710[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G60710.1 CDS gene_syn ATB2, F8A5.23, F8A5_23 gene ATB2 function Encodes ATB2. go_process response to cadmium ion|GO:0046686|16502469|IEP go_function oxidoreductase activity|GO:0016491||IEA product NAD(P)-linked oxidoreductase superfamily protein note ATB2; FUNCTIONS IN: oxidoreductase activity; INVOLVED IN: response to cadmium ion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldo/keto reductase (InterPro:IPR001395), Aldo/keto reductase subgroup (InterPro:IPR020471); BEST Arabidopsis thaliana protein match is: NAD(P)-linked oxidoreductase superfamily protein (TAIR:AT1G60730.1); Has 30719 Blast hits to 30695 proteins in 2595 species: Archae - 650; Bacteria - 20319; Metazoa - 1822; Fungi - 2308; Plants - 1286; Viruses - 0; Other Eukaryotes - 4334 (source: NCBI BLink). protein_id AT1G60710.1p transcript_id AT1G60710.1 protein_id AT1G60710.1p transcript_id AT1G60710.1 LOCN 1000-Promotor COOR C/22355073-22355411,22355506-22355608,22355689-22355861,22356022-22356222,22356406-22356627 HITS At1g60720[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G60720.1 CDS gene_syn F8A5.34, F8A5_34 go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product RNA-directed DNA polymerase (reverse transcriptase)-related family protein note RNA-directed DNA polymerase (reverse transcriptase)-related family protein; CONTAINS InterPro DOMAIN/s: RNA-directed DNA polymerase (reverse transcriptase), related (InterPro:IPR015706); BEST Arabidopsis thaliana protein match is: RNA-directed DNA polymerase (reverse transcriptase)-related family protein (TAIR:AT1G33710.1); Has 592 Blast hits to 584 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 592; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT1G60720.1p transcript_id AT1G60720.1 protein_id AT1G60720.1p transcript_id AT1G60720.1 LOCN Exon COOR W/22357072-22357941