CLON GATCACACATTTTTGTA[About MPSS mRNA] 
TYPE MPSS mRNA Target
CHRO chr4
EVAL 100.00
COOR C/13344639-13344655
NOTE 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0

HITS At4g26390[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26390.1 CDS gene_syn T25K17.3 go_process glycolysis|GO:0006096||IEA go_function magnesium ion binding|GO:0000287||IEA go_function catalytic activity|GO:0003824||IEA go_function pyruvate kinase activity|GO:0004743||IEA go_function potassium ion binding|GO:0030955||IEA go_component cellular_component|GO:0005575||ND go_process glycolysis|GO:0006096||ISS go_function pyruvate kinase activity|GO:0004743||ISS product Pyruvate kinase family protein note Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G56350.1); Has 10229 Blast hits to 10134 proteins in 2721 species: Archae - 168; Bacteria - 6082; Metazoa - 550; Fungi - 222; Plants - 538; Viruses - 0; Other Eukaryotes - 2669 (source: NCBI BLink). protein_id AT4G26390.1p transcript_id AT4G26390.1 protein_id AT4G26390.1p transcript_id AT4G26390.1 LOCN 300-UTR3 COOR W/13342207-13342425,13343057-13343518,13343606-13344418 HITS At4g26400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26400.1 CDS gene_syn M3E9.170, M3E9_170 go_component endomembrane system|GO:0012505||IEA go_function zinc ion binding|GO:0008270||IEA go_process response to chitin|GO:0010200|17722694|IEP go_function zinc ion binding|GO:0008270||ISS product RING/U-box superfamily protein note RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). protein_id AT4G26400.1p transcript_id AT4G26400.1 protein_id AT4G26400.1p transcript_id AT4G26400.1 LOCN 300-UTR3 COOR C/13344953-13346023 HITS At4g26400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26400.2 CDS gene_syn M3E9.170, M3E9_170 go_component endomembrane system|GO:0012505||IEA go_function zinc ion binding|GO:0008270||IEA go_process response to chitin|GO:0010200|17722694|IEP go_function zinc ion binding|GO:0008270||ISS product RING/U-box superfamily protein note RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). protein_id AT4G26400.2p transcript_id AT4G26400.2 protein_id AT4G26400.2p transcript_id AT4G26400.2 LOCN 300-UTR3 COOR C/13344953-13346023