CLON JAtY66O22[About JAtY] 
TYPE JAtY TAC
CHRO chr4
EVAL 0.0
COOR W/13289953-13351369

HITS At4g26250[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26250.1 CDS gene_syn AtGolS6, GolS6, T25K17.60, T25K17_60, galactinol synthase 6 gene GolS6 go_component cellular_component|GO:0005575||ND go_process carbohydrate biosynthetic process|GO:0016051||ISS go_function transferase activity, transferring glycosyl groups|GO:0016757||ISS go_function transferase activity, transferring hexosyl groups|GO:0016758||ISS product galactinol synthase 6 note galactinol synthase 6 (GolS6); CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: galactinol synthase 5 (TAIR:AT5G23790.1); Has 1309 Blast hits to 1308 proteins in 306 species: Archae - 0; Bacteria - 175; Metazoa - 257; Fungi - 268; Plants - 476; Viruses - 67; Other Eukaryotes - 66 (source: NCBI BLink). protein_id AT4G26250.1p transcript_id AT4G26250.1 protein_id AT4G26250.1p transcript_id AT4G26250.1 LOCN Exon COOR W/13289641-13289973,13290215-13290538,13290619-13290753,13290835-13291053 HITS At4g26255[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26255.1 ncRNA function Unknown gene go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product other RNA transcript_id AT4G26255.1 LOCN Exon COOR W/13293941-13293985,13294070-13294167,13294277-13294375,13294519-13294600,13294732-13294936,13295571-13295625,13295754-13296181,13296256-13296465 HITS At4g26260[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26260.1 CDS gene_syn MIOX4, MYO-INOSITOL OXYGENASE 4, T25K17.70, T25K17_70, myo-inositol oxygenase 4 gene MIOX4 function Encodes a myo-inositol oxygenase. go_component cytoplasm|GO:0005737||IEA go_process syncytium formation|GO:0006949|19691674|IGI go_process L-ascorbic acid biosynthetic process|GO:0019853|14976233|IMP go_function inositol oxygenase activity|GO:0050113|14976233|IDA product myo-inositol oxygenase 4 note myo-inositol oxygenase 4 (MIOX4); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 5 (TAIR:AT5G56640.1); Has 490 Blast hits to 486 proteins in 159 species: Archae - 0; Bacteria - 27; Metazoa - 132; Fungi - 132; Plants - 97; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). protein_id AT4G26260.1p transcript_id AT4G26260.1 protein_id AT4G26260.1p transcript_id AT4G26260.1 LOCN Exon COOR W/13297939-13297969,13298157-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299644,13299742-13299820,13299914-13299995,13300120-13300146 HITS At4g26260[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26260.2 CDS gene_syn MIOX4, MYO-INOSITOL OXYGENASE 4, T25K17.70, T25K17_70, myo-inositol oxygenase 4 gene MIOX4 function Encodes a myo-inositol oxygenase. go_component cytoplasm|GO:0005737||IEA go_process syncytium formation|GO:0006949|19691674|IGI go_process L-ascorbic acid biosynthetic process|GO:0019853|14976233|IMP go_function inositol oxygenase activity|GO:0050113|14976233|IDA product myo-inositol oxygenase 4 note myo-inositol oxygenase 4 (MIOX4); FUNCTIONS IN: inositol oxygenase activity; INVOLVED IN: L-ascorbic acid biosynthetic process, syncytium formation; LOCATED IN: cytoplasm; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF706 (InterPro:IPR007828); BEST Arabidopsis thaliana protein match is: myo-inositol oxygenase 5 (TAIR:AT5G56640.1). protein_id AT4G26260.2p transcript_id AT4G26260.2 protein_id AT4G26260.2p transcript_id AT4G26260.2 LOCN Exon COOR W/13297939-13297969,13298154-13298298,13298448-13298529,13298662-13298866,13298974-13299033,13299124-13299176,13299342-13299464,13299575-13299644,13299742-13299820,13299914-13299995,13300120-13300146 HITS At4g26270[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26270.1 CDS gene_syn PFK3, T25K17.80, T25K17_80, phosphofructokinase 3 gene PFK3 go_component cytosol|GO:0005829|17485088|IDA go_component 6-phosphofructokinase complex|GO:0005945||ISS go_process glycolysis|GO:0006096|17485088|IDA go_process glycolysis|GO:0006096||ISS go_function 6-phosphofructokinase activity|GO:0003872|17485088|IDA go_function 6-phosphofructokinase activity|GO:0003872||ISS product phosphofructokinase 3 note phosphofructokinase 3 (PFK3); CONTAINS InterPro DOMAIN/s: Pyrophosphate-dependent phosphofructokinase TP0108 (InterPro:IPR012004), Phosphofructokinase (InterPro:IPR000023); BEST Arabidopsis thaliana protein match is: phosphofructokinase 7 (TAIR:AT5G56630.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G26270.1p transcript_id AT4G26270.1 protein_id AT4G26270.1p transcript_id AT4G26270.1 LOCN Exon COOR C/13301094-13301294,13301499-13301653,13301732-13301777,13301875-13302140,13302226-13302355,13302446-13302514,13302585-13302638,13302727-13302885,13302973-13303110,13303191-13303253,13303350-13303389,13303504-13303550,13303929-13304030 HITS At4g26280[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26280.1 CDS gene_syn T25K17.90, T25K17_90 go_function sulfotransferase activity|GO:0008146||IEA go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function sulfotransferase activity|GO:0008146||ISS product P-loop containing nucleoside triphosphate hydrolases superfamily protein note P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: sulfotransferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: embryo, sepal, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Sulfotransferase domain (InterPro:IPR000863); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT5G43690.1); Has 2654 Blast hits to 2620 proteins in 183 species: Archae - 0; Bacteria - 186; Metazoa - 1675; Fungi - 1; Plants - 535; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink). protein_id AT4G26280.1p transcript_id AT4G26280.1 protein_id AT4G26280.1p transcript_id AT4G26280.1 LOCN Exon COOR C/13304721-13305338,13305396-13305722 HITS At4g26290[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26290.1 CDS gene_syn T25K17.100, T25K17_100 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product unknown protein note unknown protein; Has 9 Blast hits to 9 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). protein_id AT4G26290.1p transcript_id AT4G26290.1 protein_id AT4G26290.1p transcript_id AT4G26290.1 LOCN Exon COOR C/13307595-13307822 HITS At4g26288[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26288.1 CDS go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product unknown protein note FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). protein_id AT4G26288.1p transcript_id AT4G26288.1 protein_id AT4G26288.1p transcript_id AT4G26288.1 LOCN Exon COOR W/13307623-13307840,13307968-13308217 HITS At4g26300[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26300.1 CDS gene_syn T25K17.110, T25K17_110, emb1027, embryo defective 1027 gene emb1027 go_component chloroplast|GO:0009507|18431481|IDA go_function nucleotide binding|GO:0000166||IEA go_function aminoacyl-tRNA ligase activity|GO:0004812||IEA go_function arginine-tRNA ligase activity|GO:0004814||IEA go_function ATP binding|GO:0005524||IEA go_component mitochondrion|GO:0005739|16251277|IDA go_component chloroplast|GO:0009507|16251277|IDA go_process arginyl-tRNA aminoacylation|GO:0006420||ISS go_process embryo development ending in seed dormancy|GO:0009793|16297076|IMP go_process embryo development ending in seed dormancy|GO:0009793||NAS go_function arginine-tRNA ligase activity|GO:0004814||ISS go_function ATP binding|GO:0005524||ISS product Arginyl-tRNA synthetase, class Ic note embryo defective 1027 (emb1027); FUNCTIONS IN: nucleotide binding, aminoacyl-tRNA ligase activity, arginine-tRNA ligase activity, ATP binding; INVOLVED IN: arginyl-tRNA aminoacylation, embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aminoacyl-tRNA synthetase, class I, conserved site (InterPro:IPR001412), DALR anticodon binding (InterPro:IPR008909), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Arginyl-tRNA synthetase, class Ic, core (InterPro:IPR015945), Arginyl tRNA synthetase, class Ic, N-terminal (InterPro:IPR005148), Aminoacyl-tRNA synthetase, class 1a, anticodon-binding (InterPro:IPR009080), Arginyl-tRNA synthetase, class Ic (InterPro:IPR001278); BEST Arabidopsis thaliana protein match is: Arginyl-tRNA synthetase, class Ic (TAIR:AT1G66530.1); Has 9418 Blast hits to 9310 proteins in 2828 species: Archae - 263; Bacteria - 5535; Metazoa - 273; Fungi - 189; Plants - 85; Viruses - 3; Other Eukaryotes - 3070 (source: NCBI BLink). protein_id AT4G26300.1p transcript_id AT4G26300.1 protein_id AT4G26300.1p transcript_id AT4G26300.1 LOCN Exon COOR C/13308400-13308510,13308624-13308722,13308817-13308885,13309271-13309360,13309442-13309511,13309694-13309763,13309869-13310055,13310159-13310243,13310414-13310592,13310693-13310797,13310911-13310994,13311124-13311204,13311312-13311527,13311617-13311718,13311797-13311872,13311970-13312109,13312196-13312270,13313020-13313109 HITS At4g26310[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26310.1 CDS gene_syn T25K17.120, T25K17_120 go_process translational elongation|GO:0006414||IEA go_function translation elongation factor activity|GO:0003746||IEA go_process translational elongation|GO:0006414||ISS go_function translation elongation factor activity|GO:0003746||ISS product elongation factor P (EF-P) family protein note elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation elongation factor P/YeiP, conserved site (InterPro:IPR013852), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722), Elongation factor P, C-terminal (InterPro:IPR015365), Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G26310.1p transcript_id AT4G26310.1 protein_id AT4G26310.1p transcript_id AT4G26310.1 LOCN Exon COOR C/13314006-13314018,13314116-13314183,13314309-13314348,13314526-13314649,13314838-13314905,13315015-13315081,13315234-13315303,13315420-13315470,13315563-13315576,13315665-13315695,13315836-13316066 HITS At4g26310[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26310.2 CDS gene_syn T25K17.120, T25K17_120 go_process translational elongation|GO:0006414||IEA go_function translation elongation factor activity|GO:0003746||IEA go_process translational elongation|GO:0006414||ISS go_function translation elongation factor activity|GO:0003746||ISS product elongation factor P (EF-P) family protein note elongation factor P (EF-P) family protein; FUNCTIONS IN: translation elongation factor activity; INVOLVED IN: translational elongation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Translation protein SH3-like (InterPro:IPR008991), Nucleic acid-binding, OB-fold (InterPro:IPR012340), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Translation elongation factor P/YeiP, central (InterPro:IPR001059), Translation elongation factor, KOW-like (InterPro:IPR013185), Translation protein SH3-like, subgroup (InterPro:IPR014722); BEST Arabidopsis thaliana protein match is: elongation factor P (EF-P) family protein (TAIR:AT3G08740.1). protein_id AT4G26310.2p transcript_id AT4G26310.2 protein_id AT4G26310.2p transcript_id AT4G26310.2 LOCN Exon COOR C/13314147-13314236,13314309-13314348,13314526-13314649,13314838-13314905,13315015-13315081,13315234-13315303,13315420-13315470,13315563-13315576,13315665-13315695,13315836-13316066 HITS At4g26320[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26320.1 CDS gene_syn AGP13, T25K17.130, T25K17_130, arabinogalactan protein 13 gene AGP13 go_component anchored to membrane|GO:0031225|12068095|TAS go_component anchored to membrane|GO:0031225|12805588|TAS product arabinogalactan protein 13 note arabinogalactan protein 13 (AGP13); BEST Arabidopsis thaliana protein match is: arabinogalactan protein 14 (TAIR:AT5G56540.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT4G26320.1p transcript_id AT4G26320.1 protein_id AT4G26320.1p transcript_id AT4G26320.1 LOCN Exon COOR C/13317235-13317414 HITS At4g26330[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26330.1 CDS gene_syn ATSBT3.18, T25K17.140, T25K17_140, UNE17, UNFERTILIZED EMBRYO SAC 17 gene UNE17 go_function serine-type endopeptidase activity|GO:0004252||IEA go_function identical protein binding|GO:0042802||IEA go_component cytoplasm|GO:0005737||IDA go_component peroxisome|GO:0005777||TAS go_process proteolysis|GO:0006508||ISS go_process double fertilization forming a zygote and endosperm|GO:0009567|15634699|IMP product Subtilisin-like serine endopeptidase family protein note UNFERTILIZED EMBRYO SAC 17 (UNE17); FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, double fertilization forming a zygote and endosperm; LOCATED IN: peroxisome, cytoplasm; EXPRESSED IN: male gametophyte, leaf, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: Subtilase family protein (TAIR:AT4G10520.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G26330.1p transcript_id AT4G26330.1 protein_id AT4G26330.1p transcript_id AT4G26330.1 LOCN Exon COOR W/13320408-13320543,13320730-13320895,13320939-13321647,13321752-13321819,13321957-13322205,13322306-13322420,13322582-13322795,13322878-13323461 HITS At4g26340[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26340.1 CDS gene_syn T25K17.150, T25K17_150 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product F-box/RNI-like/FBD-like domains-containing protein note F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: FBD (InterPro:IPR013596), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G26350.1); Has 2167 Blast hits to 2117 proteins in 47 species: Archae - 0; Bacteria - 2; Metazoa - 45; Fungi - 0; Plants - 2120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT4G26340.1p transcript_id AT4G26340.1 protein_id AT4G26340.1p transcript_id AT4G26340.1 LOCN Exon COOR W/13324130-13324966,13325051-13325185,13325272-13325559 HITS At4g26350[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26350.1 CDS gene_syn T25K17.160, T25K17_160 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product F-box/RNI-like/FBD-like domains-containing protein note F-box/RNI-like/FBD-like domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), FBD (InterPro:IPR013596), F-box domain, Skp2-like (InterPro:IPR022364), FBD-like (InterPro:IPR006566), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: F-box/RNI-like/FBD-like domains-containing protein (TAIR:AT4G26340.1); Has 1865 Blast hits to 1805 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 1848; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT4G26350.1p transcript_id AT4G26350.1 protein_id AT4G26350.1p transcript_id AT4G26350.1 LOCN Exon COOR W/13326853-13327719,13327799-13327933,13328022-13328315 HITS At4g26360[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26360.1 mRNA LOCN Exon COOR C/13328763-13332375 HITS At4g26360[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26360 TE pseudo gene_syn T25K17.1 note Transposable element gene, non-LTR retrotransposon family (LINE), has a 4.9e-40 P-value blast match to GB:NP_038603 L1 repeat, Tf subfamily, member 23 (LINE-element) (Mus musculus) LOCN Exon COOR C/13328763-13332375 HITS At4g26365[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26365.1 snoRNA gene_syn 67159.SNORNA00001, 67160.SNORNA00001 go_component small nucleolar ribonucleoprotein complex|GO:0005732||TAS go_process rRNA modification|GO:0000154||TAS go_function molecular_function|GO:0003674||ND product snoRNA note snoRNA transcript_id AT4G26365.1 LOCN Exon COOR C/13332834-13332911 HITS At4g26370[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26370.1 CDS gene_syn T25K17.4 go_component chloroplast|GO:0009507|18431481|IDA go_process regulation of transcription, DNA-dependent|GO:0006355||IEA go_function RNA binding|GO:0003723||IEA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function RNA binding|GO:0003723||ISS product antitermination NusB domain-containing protein note antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NusB/RsmB/TIM44 (InterPro:IPR006027); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G26370.1p transcript_id AT4G26370.1 protein_id AT4G26370.1p transcript_id AT4G26370.1 LOCN Exon COOR C/13334099-13334236,13334338-13334436,13334707-13334794,13334887-13334941,13335079-13335213,13335379-13335455,13335840-13336153 HITS At4g26370[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26370.2 CDS gene_syn T25K17.4 go_component chloroplast|GO:0009507|18431481|IDA go_process regulation of transcription, DNA-dependent|GO:0006355||ISS go_function RNA binding|GO:0003723||ISS product antitermination NusB domain-containing protein note antitermination NusB domain-containing protein; FUNCTIONS IN: RNA binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). protein_id AT4G26370.2p transcript_id AT4G26370.2 protein_id AT4G26370.2p transcript_id AT4G26370.2 LOCN Exon COOR C/13334766-13334794,13334887-13335213,13335379-13335455,13335840-13336153 HITS At4g26375[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26375.1 tRNA gene_syn 67159.TRNA-ILE-1, 67160.TRNA-ILE-1 go_component cellular_component|GO:0005575||ND go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS product pre-tRNA note tRNA-Ile (anticodon: AAT) transcript_id AT4G26375.1 LOCN Exon COOR C/13336337-13336410 HITS At4g26380[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26380.1 CDS gene_syn T25K17.2 go_process intracellular signaling pathway|GO:0023034||IEA go_function zinc ion binding|GO:0008270||IEA go_component cellular_component|GO:0005575||ND product Cysteine/Histidine-rich C1 domain family protein note Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, RING-type (InterPro:IPR001841), DC1 (InterPro:IPR004146), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: DC1 domain-containing protein (TAIR:AT5G03360.1); Has 1810 Blast hits to 735 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 50; Fungi - 8; Plants - 1725; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). protein_id AT4G26380.1p transcript_id AT4G26380.1 protein_id AT4G26380.1p transcript_id AT4G26380.1 LOCN Exon COOR W/13338078-13341034,13341467-13341560 HITS At4g26385[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26385.1 tRNA gene_syn 67159.TRNA-ILE-2, 67160.TRNA-ILE-2 go_component cellular_component|GO:0005575||ND go_process translational elongation|GO:0006414|8980477|TAS go_function triplet codon-amino acid adaptor activity|GO:0030533|8980477|TAS product pre-tRNA note tRNA-Ile (anticodon: AAT) transcript_id AT4G26385.1 LOCN Exon COOR C/13341493-13341566 HITS At4g26390[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26390.1 CDS gene_syn T25K17.3 go_process glycolysis|GO:0006096||IEA go_function magnesium ion binding|GO:0000287||IEA go_function catalytic activity|GO:0003824||IEA go_function pyruvate kinase activity|GO:0004743||IEA go_function potassium ion binding|GO:0030955||IEA go_component cellular_component|GO:0005575||ND go_process glycolysis|GO:0006096||ISS go_function pyruvate kinase activity|GO:0004743||ISS product Pyruvate kinase family protein note Pyruvate kinase family protein; FUNCTIONS IN: pyruvate kinase activity, potassium ion binding, magnesium ion binding, catalytic activity; INVOLVED IN: glycolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf whorl, sperm cell, flower; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Pyruvate kinase, C-terminal-like (InterPro:IPR015795), Pyruvate kinase, active site (InterPro:IPR018209), Pyruvate kinase, beta-barrel-like (InterPro:IPR011037), Pyruvate kinase, alpha/beta (InterPro:IPR015794), Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Pyruvate kinase (InterPro:IPR001697), Pyruvate kinase, barrel (InterPro:IPR015793); BEST Arabidopsis thaliana protein match is: Pyruvate kinase family protein (TAIR:AT5G56350.1); Has 10229 Blast hits to 10134 proteins in 2721 species: Archae - 168; Bacteria - 6082; Metazoa - 550; Fungi - 222; Plants - 538; Viruses - 0; Other Eukaryotes - 2669 (source: NCBI BLink). protein_id AT4G26390.1p transcript_id AT4G26390.1 protein_id AT4G26390.1p transcript_id AT4G26390.1 LOCN Exon COOR W/13342207-13342425,13343057-13343518,13343606-13344418 HITS At4g26400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26400.1 CDS gene_syn M3E9.170, M3E9_170 go_component endomembrane system|GO:0012505||IEA go_function zinc ion binding|GO:0008270||IEA go_process response to chitin|GO:0010200|17722694|IEP go_function zinc ion binding|GO:0008270||ISS product RING/U-box superfamily protein note RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). protein_id AT4G26400.1p transcript_id AT4G26400.1 protein_id AT4G26400.1p transcript_id AT4G26400.1 LOCN Exon COOR C/13344953-13346023 HITS At4g26400[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26400.2 CDS gene_syn M3E9.170, M3E9_170 go_component endomembrane system|GO:0012505||IEA go_function zinc ion binding|GO:0008270||IEA go_process response to chitin|GO:0010200|17722694|IEP go_function zinc ion binding|GO:0008270||ISS product RING/U-box superfamily protein note RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: response to chitin; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, C3HC4 RING-type (InterPro:IPR018957); BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G56340.1); Has 10466 Blast hits to 10426 proteins in 293 species: Archae - 0; Bacteria - 6; Metazoa - 2695; Fungi - 997; Plants - 5209; Viruses - 70; Other Eukaryotes - 1489 (source: NCBI BLink). protein_id AT4G26400.2p transcript_id AT4G26400.2 protein_id AT4G26400.2p transcript_id AT4G26400.2 LOCN Exon COOR C/13344953-13346023 HITS At4g26410[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26410.1 CDS gene_syn M3E9.160, M3E9_160 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product Uncharacterised conserved protein UCP022280 note Uncharacterised conserved protein UCP022280; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP022280 (InterPro:IPR016803); BEST Arabidopsis thaliana protein match is: Uncharacterised conserved protein UCP022280 (TAIR:AT2G45060.1); Has 79 Blast hits to 79 proteins in 22 species: Archae - 3; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 72; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). protein_id AT4G26410.1p transcript_id AT4G26410.1 protein_id AT4G26410.1p transcript_id AT4G26410.1 LOCN Exon COOR W/13346760-13347002,13347495-13347561,13347778-13347855,13347988-13348040,13348153-13348289,13348377-13348441,13348557-13348615,13348702-13348791 HITS At4g26420[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26420.1 CDS gene_syn GAMT1, M3E9.150, M3E9_150 gene GAMT1 function A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. go_component cellular_component|GO:0005575||ND go_process seed germination|GO:0009845|17220201|IEP go_process seed development|GO:0048316|17220201|IEP go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757|17220201|IDA go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757||ISS go_function gibberellin carboxyl-O-methyltransferase activity|GO:0010341|17220201|IDA product S-adenosyl-L-methionine-dependent methyltransferases superfamily protein note GAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 916 Blast hits to 905 proteins in 122 species: Archae - 0; Bacteria - 67; Metazoa - 9; Fungi - 3; Plants - 723; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink). protein_id AT4G26420.1p transcript_id AT4G26420.1 protein_id AT4G26420.1p transcript_id AT4G26420.1 LOCN Exon COOR C/13350895-13351254,13351343-13351630,13352005-13352487 HITS At4g26420[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT4G26420.2 CDS gene_syn GAMT1, M3E9.150, M3E9_150 gene GAMT1 function A member of the Arabidopsis SABATH methyltransferase gene family. Encodes GAMT1, a methyltransferase that uses S-adenosine-L-methionine (SAM) as a methyl donor to methylate the carboxyl group of GAs, resulting in the methyl esters of GAs (MeGAs). Expressed most highly in the siliques during seed development. go_component cellular_component|GO:0005575||ND go_process seed germination|GO:0009845|17220201|IEP go_process seed development|GO:0048316|17220201|IEP go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757|17220201|IDA go_function S-adenosylmethionine-dependent methyltransferase activity|GO:0008757||ISS go_function gibberellin carboxyl-O-methyltransferase activity|GO:0010341|17220201|IDA product S-adenosyl-L-methionine-dependent methyltransferases superfamily protein note GAMT1; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: gibberellic acid methyltransferase 2 (TAIR:AT5G56300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT4G26420.2p transcript_id AT4G26420.2 protein_id AT4G26420.2p transcript_id AT4G26420.2 LOCN Exon COOR C/13351202-13351264,13351343-13351630,13352005-13352451