CLON AATATTCGGTTCGGGTC[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr1
EVAL 100.00
COOR W/18430-18446
NOTE 1, +0 1 0 0 0


CLON AATATTCGGTTCGGGTC[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr1
EVAL 100.00
COOR C/3073507-3073523
NOTE 1, +0 1 0 0 0


CLON AATATTCGGTTCGGGTC[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr1
EVAL 100.00
COOR W/23174905-23174948
NOTE 6, +0 1 0 0 0, +11 9 0 0 0, +15 7 0 0 0, +16 12 32 25 28, +17 0 3 1 2, +27 1 0 0 0

HITS At1g62580[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G62580.1 CDS gene_syn T3P18.14, T3P18_14 go_component intrinsic to endoplasmic reticulum membrane|GO:0031227||IEA go_process oxidation reduction|GO:0055114||IEA go_function flavin-containing monooxygenase activity|GO:0004499||IEA go_function FAD binding|GO:0050660||IEA go_function NADP or NADPH binding|GO:0050661||IEA go_function monooxygenase activity|GO:0004497||ISS product Flavin-binding monooxygenase family protein note Flavin-binding monooxygenase family protein; FUNCTIONS IN: NADP or NADPH binding, monooxygenase activity, FAD binding, flavin-containing monooxygenase activity; INVOLVED IN: oxidation reduction; LOCATED IN: intrinsic to endoplasmic reticulum membrane; CONTAINS InterPro DOMAIN/s: FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027), Dimethylaniline monooxygenase, N-oxide-forming (InterPro:IPR012143), Flavin-containing monooxygenase-like (InterPro:IPR020946); BEST Arabidopsis thaliana protein match is: Flavin-containing monooxygenase family protein (TAIR:AT1G63340.1); Has 12102 Blast hits to 11779 proteins in 1619 species: Archae - 69; Bacteria - 6462; Metazoa - 1123; Fungi - 1131; Plants - 751; Viruses - 0; Other Eukaryotes - 2566 (source: NCBI BLink). protein_id AT1G62580.1p transcript_id AT1G62580.1 protein_id AT1G62580.1p transcript_id AT1G62580.1 LOCN Intron COOR W/23173333-23173921,23175684-23175754,23175827-23175979,23176062-23176144,23176217-23176352,23176380-23176619,23176710-23176931 CLON AATATTCGGTTCGGGTC[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr1 EVAL 100.00 COOR C/29319514-29319530 NOTE 1, +0 1 0 0 0 HITS At1g77990[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G77990.1 CDS gene_syn AST56, SULPHATE TRANSPORTER 2;2, SULTR2;2 gene AST56 function cDNA encoding a sulfate transporter. go_component membrane|GO:0016020||IEA go_component integral to membrane|GO:0016021||IEA go_process transport|GO:0006810||IEA go_process sulfate transport|GO:0008272||IEA go_process transmembrane transport|GO:0055085||IEA go_function sulfate transmembrane transporter activity|GO:0015116||ISS product STAS domain / Sulfate transporter family note AST56; FUNCTIONS IN: sulfate transmembrane transporter activity; INVOLVED IN: sulfate transport, transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Sulphate transporter (InterPro:IPR011547), Sulphate transporter/antisigma-factor antagonist STAS (InterPro:IPR002645), Sulphate anion transporter, conserved site (InterPro:IPR018045), Sulphate anion transporter (InterPro:IPR001902); BEST Arabidopsis thaliana protein match is: slufate transporter 2;1 (TAIR:AT5G10180.1); Has 9792 Blast hits to 9696 proteins in 1853 species: Archae - 35; Bacteria - 5971; Metazoa - 1157; Fungi - 422; Plants - 555; Viruses - 0; Other Eukaryotes - 1652 (source: NCBI BLink). protein_id AT1G77990.1p transcript_id AT1G77990.1 protein_id AT1G77990.1p transcript_id AT1G77990.1 LOCN Intron COOR C/29317965-29318117,29318225-29318301,29318408-29318502,29318621-29318814,29320783-29321069,29321416-29321542,29321632-29321862,29321964-29322029,29322126-29322300,29322409-29322616,29322698-29322746,29322878-29323249 CLON AATATTCGGTTCGGGTC[About MPSS sRNA] TYPE MPSS sRNA Contig CHRO chr3 EVAL 100.00 COOR C/2628766-2628782 NOTE 1, +0 1 0 0 0