CODE At1g01010 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G01010.1 CDS gene_syn ANAC001, NAC domain containing protein 1, NAC001, T25K16.1, T25K16_1 gene NAC001 go_process regulation of transcription|GO:0045449||IEA go_component cellular_component|GO:0005575||ND go_process multicellular organismal development|GO:0007275||ISS go_function sequence-specific DNA binding transcription factor activity|GO:0003700|11118137|ISS product NAC domain containing protein 1 note NAC domain containing protein 1 (NAC001); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 69 (TAIR:AT4G01550.1); Has 2503 Blast hits to 2496 proteins in 69 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2502; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). protein_id AT1G01010.1p transcript_id AT1G01010.1 protein_id AT1G01010.1p transcript_id AT1G01010.1 COOR W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630 HITS BP562468 [GenBank] TYPE ESTs EVAL e-157 LOCN Exon COOR W/3631-3913,3996-4176 HITS R14978 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.87 LOCN Exon COOR W/3631-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5697 NOTE AF439834 HITS AV826635 [GenBank] TYPE ESTs EVAL e-155 LOCN Exon COOR W/3674-3913,3996-4276,4486-4581 NOTE EL124732 HITS RAFL08-19-M04 [NCBI] [Order from RIKEN BRC] TYPE RIKEN FL cDNA EVAL 99.16 LOCN Exon COOR W/3674-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5899 HITS GATCTCTCTCGCTCTCT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR5 COOR C/3691-3707 NOTE 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 HITS PYAt1g01010 [Seq] [About Peking Yale TF] [Order from ABRC] (ORF amplified by RT-PCR and cloned into the Gateway( TM) system; 5' and 3' end sequencing has been performed on this clone.) TYPE PY TF EVAL 0.0 LOCN Exon COOR W/3760-3913,3996-4276,4486-4604,4705-5095,5174-5324,5437-5627 HITS U14978 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP pUni Clone EVAL 100.00 LOCN Exon COOR W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630 NOTE BT001115 HITS G14978 Invitrogen/Salk Gateway clone, originally SSP/Salk pUNI clone. [pENTR223 Seq] [pENTR223 Map] [Orignal SSP/SALK U] [Order from ABRC] TYPE GateWay Clone EVAL 100.00 LOCN Exon COOR W/3760-3913,3996-4276,4486-4605,4706-5095,5174-5326,5439-5630 NOTE U14978 BT001115 pENTR_Sfi HITS 261585_at [gAtlas] TYPE Affy Probes EVAL e-130 LOCN Exon COOR W/4861-5095,5174-5324,5437-5615 HITS BP779869 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/5437-5832 HITS RAFL09-86-B21 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL 8e-59 LOCN Exon COOR W/5440-5610 HITS AV795918 [GenBank] TYPE ESTs EVAL 0.0 LOCN Exon COOR C/5470-5899 NOTE AV810144 BP788378 BP621258 HITS RAFL08-19-M04 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-115 LOCN Exon COOR W/5470-5679,5699-5753,5802-5899 HITS GATCATGTTCTTGAGAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/5560-5576 NOTE 7 28 46 33 12 14 34 11 11 28 4 0 9 30 27 46 48 HITS GATCATTCTTGTTGGTT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR W/5612-5628 NOTE 195 62 18 33 2 0 13 0 2 18 10 0 0 8 0 86 2 HITS EG452794 [GenBank] TYPE ESTs EVAL e-177 LOCN 300-UTR3 COOR W/5930-6263,6437-6762