AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON CTCTTAGCTAAGAGCCA[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr2
EVAL 100.00
COOR W/14386890-14386906
NOTE 1, +0 1 0 0 0


CLON CTCTTAGCTAAGAGCCA[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr1
EVAL 100.00
COOR W/42408-42424
NOTE 1, +0 1 0 0 0


CLON CTCTTAGCTAAGAGCCA[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr2
EVAL 100.00
COOR W/14387028-14387044
NOTE 1, +0 1 0 0 0


CLON CTCTTAGCTAAGAGCCA[About MPSS sRNA] 
TYPE MPSS sRNA Contig
CHRO chr2
EVAL 100.00
COOR C/17788474-17788490
NOTE 1, +0 1 0 0 0

HITS At2g42730[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT2G42730.1 CDS gene_syn F7D19.27, F7D19_27 go_component nucleus|GO:0005634||IEA go_process transcription|GO:0006350||IEA go_function zinc ion binding|GO:0008270||IEA product F-box family protein note F-box family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: transcription; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type (InterPro:IPR003617), F-box domain, cyclin-like (InterPro:IPR001810), FBD-like (InterPro:IPR006566), Transcription elongation factor S-II, central domain (InterPro:IPR003618), Transcription factor IIS, N-terminal (InterPro:IPR017923), Transcription elongation factor S-IIM (InterPro:IPR017890), F-box domain, Skp2-like (InterPro:IPR022364), Leucine-rich repeat 2 (InterPro:IPR013101); BEST Arabidopsis thaliana protein match is: FBD, F-box, Skp2-like and Leucine Rich Repeat domains containing protein (TAIR:AT2G42720.1); Has 2687 Blast hits to 2614 proteins in 178 species: Archae - 0; Bacteria - 0; Metazoa - 415; Fungi - 138; Plants - 2100; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). protein_id AT2G42730.1p transcript_id AT2G42730.1 protein_id AT2G42730.1p transcript_id AT2G42730.1 LOCN Intron COOR C/17787454-17788331,17789644-17789920,17790006-17790146,17790301-17791218

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
© SIGnAL 2000-2016 | Home | About Us | Microarray | FL-cDNA | SALK T-DNA | Contact Us |