AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON CATGTGTTTACTGA[About SAGE] 
TYPE SAGE Target
CHRO chr3
EVAL 100
COOR W/7463632-7463645

HITS At3g21250[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT3G21250.1 CDS gene_syn ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATMRP6, MRP6, multidrug resistance-associated protein 6 gene MRP6 function member of MRP subfamily go_component plant-type vacuole|GO:0000325|16618929|IDA go_component plasma membrane|GO:0005886|17151019|IDA go_component vacuolar membrane|GO:0005774|16618929|IDA go_process response to cyclopentenone|GO:0010583|18334669|IEP go_function ATPase activity, coupled to transmembrane movement of substances|GO:0042626|11346655|ISS product multidrug resistance-associated protein 6 note multidrug resistance-associated protein 6 (MRP6); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to cyclopentenone; LOCATED IN: vacuolar membrane, plasma membrane, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1); Has 598023 Blast hits to 338310 proteins in 3899 species: Archae - 10844; Bacteria - 482752; Metazoa - 12132; Fungi - 7443; Plants - 6523; Viruses - 16; Other Eukaryotes - 78313 (source: NCBI BLink). protein_id AT3G21250.1p transcript_id AT3G21250.1 protein_id AT3G21250.1p transcript_id AT3G21250.1 LOCN 1000-Promotor COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460455-7460508,7460583-7460903,7461001-7462952,7463246-7463261 HITS At3g21250[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT3G21250.2 CDS gene_syn ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, ATMRP6, MRP6, multidrug resistance-associated protein 6 gene MRP6 function member of MRP subfamily go_component vacuolar membrane|GO:0005774|16618929|IDA go_process response to cyclopentenone|GO:0010583|18334669|IEP go_function ATPase activity, coupled to transmembrane movement of substances|GO:0042626|11346655|ISS product multidrug resistance-associated protein 6 note multidrug resistance-associated protein 6 (MRP6); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 14 (TAIR:AT3G59140.1). protein_id AT3G21250.2p transcript_id AT3G21250.2 protein_id AT3G21250.2p transcript_id AT3G21250.2 LOCN 1000-Promotor COOR C/7457668-7457789,7457875-7458114,7458203-7458266,7458344-7458649,7458732-7458946,7459100-7459394,7459481-7459645,7459723-7460334,7460422-7460508,7460583-7460903,7461001-7462952,7463246-7463261 CLON CATGTGTTTACTGA[About SAGE] TYPE SAGE Target CHRO chr1 EVAL 100 COOR W/62804-62817 HITS At1g01130[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01130.1 CDS gene_syn F6F3.33 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product unknown protein note CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT1G01130.1p transcript_id AT1G01130.1 protein_id AT1G01130.1p transcript_id AT1G01130.1 LOCN Intron COOR C/61905-61949,62050-62124,63557-63811

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
© SIGnAL 2000-2016 | Home | About Us | Microarray | FL-cDNA | SALK T-DNA | Contact Us |