AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON GATCTTGACAGTTGATT[About MPSS mRNA] 
TYPE MPSS mRNA Target
CHRO chr1
EVAL 100.00
COOR C/54510-54526
NOTE 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0

HITS At1g01110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01110.2 CDS gene_syn IQ-domain 18, IQD18, T25K16.10, T25K16_10 gene IQD18 go_function molecular_function|GO:0003674||ND product IQ-domain 18 note IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). protein_id AT1G01110.2p transcript_id AT1G01110.2 protein_id AT1G01110.2p transcript_id AT1G01110.2 LOCN 300-UTR3 COOR W/52239-52346,52434-52730,52938-53183,53484-53624,53703-54494 HITS At1g01110[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01110.1 CDS gene_syn IQ-domain 18, IQD18, T25K16.10, T25K16_10 gene IQD18 go_component mitochondrion|GO:0005739||IEA go_function molecular_function|GO:0003674||ND product IQ-domain 18 note IQ-domain 18 (IQD18); FUNCTIONS IN: molecular_function unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: IQ-domain 17 (TAIR:AT4G00820.1); Has 1112 Blast hits to 678 proteins in 50 species: Archae - 0; Bacteria - 10; Metazoa - 109; Fungi - 16; Plants - 528; Viruses - 4; Other Eukaryotes - 445 (source: NCBI BLink). protein_id AT1G01110.1p transcript_id AT1G01110.1 protein_id AT1G01110.1p transcript_id AT1G01110.1 LOCN 300-UTR3 COOR W/53022-53183,53484-53624,53703-54494 CLON GATCTTGACAGTTGATT[About MPSS mRNA] TYPE MPSS mRNA Target CHRO chr1 EVAL 100.00 COOR W/26764822-26764838 NOTE 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 HITS At1g70985[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G70985.1 CDS go_component anchored to membrane|GO:0031225|12068095|TAS go_component anchored to membrane|GO:0031225|12805588|TAS go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product hydroxyproline-rich glycoprotein family protein note hydroxyproline-rich glycoprotein family protein; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT1G23050.1); Has 1488 Blast hits to 893 proteins in 162 species: Archae - 2; Bacteria - 187; Metazoa - 240; Fungi - 90; Plants - 878; Viruses - 17; Other Eukaryotes - 74 (source: NCBI BLink). protein_id AT1G70985.1p transcript_id AT1G70985.1 protein_id AT1G70985.1p transcript_id AT1G70985.1 LOCN Exon COOR C/26764774-26765181

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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