AtTome: Genome Express Database ( Aug. 2, 2016 )


CODE At1g01140 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G01140.3 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). protein_id AT1G01140.3p transcript_id AT1G01140.3 protein_id AT1G01140.3p transcript_id AT1G01140.3 COOR C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS BP632666 [GenBank] TYPE ESTs EVAL e-133 LOCN Exon COOR W/64166-64421 HITS BP599166 [GenBank] TYPE ESTs EVAL e-173 LOCN Exon COOR W/64167-64477,64584-64658,64763-64809 NOTE AV817447 AV807662 BP600864 BP604283 BP607140 BP616311 BP617305 BP623099 BP627397 BP629580 BP630029 BP635563 BP668812 BP784053 BP791805 AV805656 BP777159 AV799654 AV809366 AV440328 HITS RAFL09-20-N24 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-149 LOCN Exon COOR C/64171-64477,64584-64656 HITS AV782299 [GenBank] TYPE ESTs EVAL e-166 LOCN Exon COOR W/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 NOTE BP791602 AV795034 BP613791 EH847924 CD529629 CD529819 AV816834 BP606257 HITS RAFL04-16-A16 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-166 LOCN Exon COOR C/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 HITS R15436 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.82 LOCN Exon COOR C/64182-64383,64382-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67619 NOTE AF386999 HITS BX817129 [GenBank] [Order] TYPE GSLT cDNA EVAL e-158 LOCN Exon COOR C/64201-64477,64583-64658,64753-64807,64901-65018,65111-65216,65329-65456,65563-65652,65739-65866,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67606 HITS GATCATCCTCAAACTCG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR C/64209-64225 NOTE 0 66 105 9 168 10 52 32 12 0 8 18 20 83 0 0 63 HITS U15436 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP Gateway Clone EVAL 99.93 LOCN Exon COOR C/64290-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 NOTE U15436 AY093242 pENTR-TOPO HITS AI997157 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR W/64337-64478,64584-64658,64753-64807,64901-65018,65111-65219,65333-65430 NOTE EL002880 EH825693 DR340107 EH958447 DR340108 EL182048 EL146905 EL062528 EL204773 HITS AF295664 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64582-64653,64748-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65858,66100-66160,66262-66342,66450-66557,66678-66746,66832-66897,67324-67512 HITS AF339147 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS 261581_at [gAtlas] TYPE Affy Probes EVAL 8e-66 LOCN Exon COOR C/64415-64475,64582-64658,64753-64807,64901-65018,65111-65216,65330-65456,65563-65598 HITS GATCCGGTTAACATCTC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Intron COOR C/64521-64537 NOTE 0 0 0 0 0 0 0 0 0 0 1 0 0 10 0 0 0 HITS CD530102 [GenBank] TYPE ESTs EVAL 2e-63 LOCN Exon COOR C/64915-65017,65110-65216,65329-65456,65561-65663 NOTE EH798177 EL104590 ES002693 EH954868 EL280761 EH915951 EL013662 HITS GATCTGCGAGTGAAATA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/64964-64980 NOTE 0 25 50 0 14 58 100 100 102 5 81 12 6 77 0 0 31 HITS DR365407 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR C/65330-65456,65563-65652,65739-65866,66109-66159,66261-66344 NOTE EL035214 ES141143 ES159177 ES078198 ES176091 EH884272 BG459451 HITS CB259664 [GenBank] TYPE ESTs EVAL e-136 LOCN Exon COOR C/65749-65864,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67569 HITS AV821759 [GenBank] TYPE ESTs EVAL e-162 LOCN Exon COOR C/66105-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67619 HITS DR365409 [GenBank] TYPE ESTs EVAL e-168 LOCN Exon COOR C/66112-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67625 NOTE EL278475 DR292165 DR365408 EL081224 BP852980 EH795451 BP823331 EL209000 AV827866 EL087360 EL211129 EH826415 EH911387 EH884784 HITS BX833652 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR W/67313-67951 HITS GATCAAGCCGCTATCAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/67370-67386 NOTE 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 HITS GATCTAGAGCCGTTGAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR5 COOR C/67534-67550 NOTE 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 CODE At1g01140 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G01140.2 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130491 Blast hits to 128500 proteins in 4421 species: Archae - 165; Bacteria - 15543; Metazoa - 48035; Fungi - 13165; Plants - 31462; Viruses - 522; Other Eukaryotes - 21599 (source: NCBI BLink). protein_id AT1G01140.2p transcript_id AT1G01140.2 protein_id AT1G01140.2p transcript_id AT1G01140.2 COOR C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS BP632666 [GenBank] TYPE ESTs EVAL e-133 LOCN Exon COOR W/64166-64421 HITS BP599166 [GenBank] TYPE ESTs EVAL e-173 LOCN Exon COOR W/64167-64477,64584-64658,64763-64809 NOTE AV817447 AV807662 BP600864 BP604283 BP607140 BP616311 BP617305 BP623099 BP627397 BP629580 BP630029 BP635563 BP668812 BP784053 BP791805 AV805656 BP777159 AV799654 AV809366 AV440328 HITS RAFL09-20-N24 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-149 LOCN Exon COOR C/64171-64477,64584-64656 HITS AV782299 [GenBank] TYPE ESTs EVAL e-166 LOCN Exon COOR W/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 NOTE BP791602 AV795034 BP613791 EH847924 CD529629 CD529819 AV816834 BP606257 HITS RAFL04-16-A16 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-166 LOCN Exon COOR C/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 HITS R15436 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.82 LOCN Exon COOR C/64182-64383,64382-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67619 NOTE AF386999 HITS BX817129 [GenBank] [Order] TYPE GSLT cDNA EVAL e-158 LOCN Exon COOR C/64201-64477,64583-64658,64753-64807,64901-65018,65111-65216,65329-65456,65563-65652,65739-65866,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67606 HITS GATCATCCTCAAACTCG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR C/64209-64225 NOTE 0 66 105 9 168 10 52 32 12 0 8 18 20 83 0 0 63 HITS U15436 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP Gateway Clone EVAL 99.93 LOCN Exon COOR C/64290-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 NOTE U15436 AY093242 pENTR-TOPO HITS AI997157 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR W/64337-64478,64584-64658,64753-64807,64901-65018,65111-65219,65333-65430 NOTE EL002880 EH825693 DR340107 EH958447 DR340108 EL182048 EL146905 EL062528 EL204773 HITS AF295664 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64582-64653,64748-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65858,66100-66160,66262-66342,66450-66557,66678-66746,66832-66897,67324-67512 HITS AF339147 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS 261581_at [gAtlas] TYPE Affy Probes EVAL 8e-66 LOCN Exon COOR C/64415-64475,64582-64658,64753-64807,64901-65018,65111-65216,65330-65456,65563-65598 HITS GATCCGGTTAACATCTC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Intron COOR C/64521-64537 NOTE 0 0 0 0 0 0 0 0 0 0 1 0 0 10 0 0 0 HITS CD530102 [GenBank] TYPE ESTs EVAL 2e-63 LOCN Exon COOR C/64915-65017,65110-65216,65329-65456,65561-65663 NOTE EH798177 EL104590 ES002693 EH954868 EL280761 EH915951 EL013662 HITS GATCTGCGAGTGAAATA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/64964-64980 NOTE 0 25 50 0 14 58 100 100 102 5 81 12 6 77 0 0 31 HITS DR365407 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR C/65330-65456,65563-65652,65739-65866,66109-66159,66261-66344 NOTE EL035214 ES141143 ES159177 ES078198 ES176091 EH884272 BG459451 HITS CB259664 [GenBank] TYPE ESTs EVAL e-136 LOCN Exon COOR C/65749-65864,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67569 HITS AV821759 [GenBank] TYPE ESTs EVAL e-162 LOCN Exon COOR C/66105-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67619 HITS DR365409 [GenBank] TYPE ESTs EVAL e-168 LOCN Exon COOR C/66112-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67625 NOTE EL278475 DR292165 DR365408 EL081224 BP852980 EH795451 BP823331 EL209000 AV827866 EL087360 EL211129 EH826415 EH911387 EH884784 HITS BX833652 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR W/67313-67951 HITS GATCAAGCCGCTATCAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/67370-67386 NOTE 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 HITS GATCTAGAGCCGTTGAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR5 COOR C/67534-67550 NOTE 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 CODE At1g01140 [Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene CHRO chr1 TITL AT1G01140.1 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), CBL-interacting protein kinase (InterPro:IPR020660), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130203 Blast hits to 128118 proteins in 4349 species: Archae - 165; Bacteria - 15262; Metazoa - 47961; Fungi - 13206; Plants - 31482; Viruses - 522; Other Eukaryotes - 21605 (source: NCBI BLink). protein_id AT1G01140.1p transcript_id AT1G01140.1 protein_id AT1G01140.1p transcript_id AT1G01140.1 COOR C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS BP632666 [GenBank] TYPE ESTs EVAL e-133 LOCN Exon COOR W/64166-64421 HITS BP599166 [GenBank] TYPE ESTs EVAL e-173 LOCN Exon COOR W/64167-64477,64584-64658,64763-64809 NOTE AV817447 AV807662 BP600864 BP604283 BP607140 BP616311 BP617305 BP623099 BP627397 BP629580 BP630029 BP635563 BP668812 BP784053 BP791805 AV805656 BP777159 AV799654 AV809366 AV440328 HITS RAFL09-20-N24 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-149 LOCN Exon COOR C/64171-64477,64584-64656 HITS AV782299 [GenBank] TYPE ESTs EVAL e-166 LOCN Exon COOR W/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 NOTE BP791602 AV795034 BP613791 EH847924 CD529629 CD529819 AV816834 BP606257 HITS RAFL04-16-A16 [NCBI] [Order from RIKEN BRC] TYPE RIKEN EST EVAL e-166 LOCN Exon COOR C/64182-64477,64584-64658,64753-64807,64901-65018,65111-65219,65333-65385 HITS R15436 [SSP] [About & Citation] [NCBI] [Order] - click RAFL TYPE SSP cDNA EVAL 99.82 LOCN Exon COOR C/64182-64383,64382-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67619 NOTE AF386999 HITS BX817129 [GenBank] [Order] TYPE GSLT cDNA EVAL e-158 LOCN Exon COOR C/64201-64477,64583-64658,64753-64807,64901-65018,65111-65216,65329-65456,65563-65652,65739-65866,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67606 HITS GATCATCCTCAAACTCG [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR3 COOR C/64209-64225 NOTE 0 66 105 9 168 10 52 32 12 0 8 18 20 83 0 0 63 HITS U15436 [SSP] [About & Citation] [NCBI] [Order from ABRC] TYPE SSP Gateway Clone EVAL 99.93 LOCN Exon COOR C/64290-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 NOTE U15436 AY093242 pENTR-TOPO HITS AI997157 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR W/64337-64478,64584-64658,64753-64807,64901-65018,65111-65219,65333-65430 NOTE EL002880 EH825693 DR340107 EH958447 DR340108 EL182048 EL146905 EL062528 EL204773 HITS AF295664 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64582-64653,64748-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65858,66100-66160,66262-66342,66450-66557,66678-66746,66832-66897,67324-67512 HITS AF339147 [GenBank] TYPE Community cDNA EVAL 100.00 LOCN Exon COOR C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS 261581_at [gAtlas] TYPE Affy Probes EVAL 8e-66 LOCN Exon COOR C/64415-64475,64582-64658,64753-64807,64901-65018,65111-65216,65330-65456,65563-65598 HITS GATCCGGTTAACATCTC [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Intron COOR C/64521-64537 NOTE 0 0 0 0 0 0 0 0 0 0 1 0 0 10 0 0 0 HITS CD530102 [GenBank] TYPE ESTs EVAL 2e-63 LOCN Exon COOR C/64915-65017,65110-65216,65329-65456,65561-65663 NOTE EH798177 EL104590 ES002693 EH954868 EL280761 EH915951 EL013662 HITS GATCTGCGAGTGAAATA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/64964-64980 NOTE 0 25 50 0 14 58 100 100 102 5 81 12 6 77 0 0 31 HITS DR365407 [GenBank] TYPE ESTs EVAL 2e-66 LOCN Exon COOR C/65330-65456,65563-65652,65739-65866,66109-66159,66261-66344 NOTE EL035214 ES141143 ES159177 ES078198 ES176091 EH884272 BG459451 HITS CB259664 [GenBank] TYPE ESTs EVAL e-136 LOCN Exon COOR C/65749-65864,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67569 HITS AV821759 [GenBank] TYPE ESTs EVAL e-162 LOCN Exon COOR C/66105-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67619 HITS DR365409 [GenBank] TYPE ESTs EVAL e-168 LOCN Exon COOR C/66112-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67625 NOTE EL278475 DR292165 DR365408 EL081224 BP852980 EH795451 BP823331 EL209000 AV827866 EL087360 EL211129 EH826415 EH911387 EH884784 HITS BX833652 [GenBank] [Order] TYPE GSLT cDNA EVAL 0.0 LOCN Exon COOR W/67313-67951 HITS GATCAAGCCGCTATCAA [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN Exon COOR C/67370-67386 NOTE 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 HITS GATCTAGAGCCGTTGAT [About MPSS mRNA] TYPE MPSS mRNA Target EVAL 100.00 LOCN 300-UTR5 COOR C/67534-67550 NOTE 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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