AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON RAFL08-10-E13[NCBI] [Order from RIKEN BRC] 
TYPE RIKEN FL cDNA
CHRO chr1
EVAL 99.30
COOR C/57272-59124

HITS At1g01120[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01120.1 CDS gene_syn 3-ketoacyl-CoA synthase 1, KCS1, T25K16.11, T25K16_11 gene KCS1 function Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis. go_component cytosolic ribosome|GO:0022626|15821981|IDA go_component endoplasmic reticulum|GO:0005783|18465198|IDA go_component membrane|GO:0016020|10074711|ISS go_process very long-chain fatty acid metabolic process|GO:0000038|10074711|IDA go_process response to osmotic stress|GO:0006970|18465198|IEP go_process response to cold|GO:0009409|18465198|IEP go_process response to light stimulus|GO:0009416|18465198|IEP go_process wax biosynthetic process|GO:0010025|10074711|IDA go_process wax biosynthetic process|GO:0010025|10074711|IMP go_process fatty acid elongation|GO:0030497|10074711|IDA go_process cuticle development|GO:0042335|10074711|IMP go_function acyltransferase activity|GO:0008415||ISS go_function fatty acid elongase activity|GO:0009922|10074711|IDA product 3-ketoacyl-CoA synthase 1 note 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). protein_id AT1G01120.1p transcript_id AT1G01120.1 protein_id AT1G01120.1p transcript_id AT1G01120.1 LOCN Exon COOR C/57392-58978 CLON RAFL08-10-E13[NCBI] [Order from RIKEN BRC] TYPE RIKEN EST CHRO chr1 EVAL e-106 COOR C/57272-57469 HITS At1g01120[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01120.1 CDS gene_syn 3-ketoacyl-CoA synthase 1, KCS1, T25K16.11, T25K16_11 gene KCS1 function Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis. go_component cytosolic ribosome|GO:0022626|15821981|IDA go_component endoplasmic reticulum|GO:0005783|18465198|IDA go_component membrane|GO:0016020|10074711|ISS go_process very long-chain fatty acid metabolic process|GO:0000038|10074711|IDA go_process response to osmotic stress|GO:0006970|18465198|IEP go_process response to cold|GO:0009409|18465198|IEP go_process response to light stimulus|GO:0009416|18465198|IEP go_process wax biosynthetic process|GO:0010025|10074711|IDA go_process wax biosynthetic process|GO:0010025|10074711|IMP go_process fatty acid elongation|GO:0030497|10074711|IDA go_process cuticle development|GO:0042335|10074711|IMP go_function acyltransferase activity|GO:0008415||ISS go_function fatty acid elongase activity|GO:0009922|10074711|IDA product 3-ketoacyl-CoA synthase 1 note 3-ketoacyl-CoA synthase 1 (KCS1); FUNCTIONS IN: fatty acid elongase activity, acyltransferase activity; INVOLVED IN: in 7 processes; LOCATED IN: cytosolic ribosome, endoplasmic reticulum, membrane; EXPRESSED IN: 29 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thiolase-like (InterPro:IPR016039), Very-long-chain 3-ketoacyl-CoA synthase (InterPro:IPR012392), 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal (InterPro:IPR013747), FAE1/Type III polyketide synthase-like protein (InterPro:IPR013601), Thiolase-like, subgroup (InterPro:IPR016038); BEST Arabidopsis thaliana protein match is: 3-ketoacyl-CoA synthase 11 (TAIR:AT2G26640.1); Has 3961 Blast hits to 3946 proteins in 966 species: Archae - 0; Bacteria - 1388; Metazoa - 0; Fungi - 5; Plants - 2408; Viruses - 0; Other Eukaryotes - 160 (source: NCBI BLink). protein_id AT1G01120.1p transcript_id AT1G01120.1 protein_id AT1G01120.1p transcript_id AT1G01120.1 LOCN Exon COOR C/57392-58978

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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