AtTome: Genome Express Database ( Aug. 2, 2016 )


CLON BX817129[GenBank] [Order] 
TYPE GSLT cDNA
CHRO chr1
EVAL e-158
COOR C/64201-64477,64583-64658,64753-64807,64901-65018,65111-65216,65329-65456,65563-65652,65739-65866,66109-66159,66261-66342,66450-66557,66678-66751,66837-66897,67324-67606

HITS At1g01130[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG] 
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01130.1 CDS gene_syn F6F3.33 go_component cellular_component|GO:0005575||ND go_process biological_process|GO:0008150||ND go_function molecular_function|GO:0003674||ND product unknown protein note CONTAINS InterPro DOMAIN/s: CBL-interacting protein kinase (InterPro:IPR020660), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47170.1); Has 176 Blast hits to 176 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 176; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). protein_id AT1G01130.1p transcript_id AT1G01130.1 protein_id AT1G01130.1p transcript_id AT1G01130.1 LOCN 1000-Promotor COOR C/61905-61949,62050-62124,63557-63811 HITS At1g01140[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01140.1 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), CBL-interacting protein kinase (InterPro:IPR020660), NAF domain (InterPro:IPR004041), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130203 Blast hits to 128118 proteins in 4349 species: Archae - 165; Bacteria - 15262; Metazoa - 47961; Fungi - 13206; Plants - 31482; Viruses - 522; Other Eukaryotes - 21605 (source: NCBI BLink). protein_id AT1G01140.1p transcript_id AT1G01140.1 protein_id AT1G01140.1p transcript_id AT1G01140.1 LOCN Exon COOR C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS At1g01140[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01140.2 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130491 Blast hits to 128500 proteins in 4421 species: Archae - 165; Bacteria - 15543; Metazoa - 48035; Fungi - 13165; Plants - 31462; Viruses - 522; Other Eukaryotes - 21599 (source: NCBI BLink). protein_id AT1G01140.2p transcript_id AT1G01140.2 protein_id AT1G01140.2p transcript_id AT1G01140.2 LOCN Exon COOR C/64398-64475,64582-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65733-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512 HITS At1g01140[Seq] [Transcriptome] [RiceGE] [SNP Search] [gAtlas] [GO] [NCBI] [NCBI Map] [TAIR] [MIPS] [MPSS] [AMPDB/SUBA] [KEGG]
[Protein Interaction] [TIGR] [Synteny Gene Pairs] [AtGene Express] [AtGDB View] [e-FP Browser] [NASCArrays Digital Northern]
[YE Clone] [NASCArrays Spot History] [Genevestigator Gene Atlas Gene Chronologer Response Viewer] [POGs] [AthaMap]
[Phosphat] [Methylome] [UToronto BAR Expression Angler NASCArrays BADB Hormone Stress Pathogen Tissue Ext Tissue] TYPE Gene TITL AT1G01140.3 CDS gene_syn CBL-interacting protein kinase 9, CIPK9, F6F3.28, PKS6, PROTEIN KINASE 6, SNF1-RELATED PROTEIN KINASE 3.12, SnRK3.12 gene CIPK9 function Encodes a CBL-interacting protein kinase with similarity to SOS2 go_function protein kinase activity|GO:0004672||IEA go_function protein serine/threonine kinase activity|GO:0004674||IEA go_function ATP binding|GO:0005524||IEA go_process response to cold|GO:0009409|17486125|IEP go_process response to wounding|GO:0009611|17486125|IEP go_process response to salt stress|GO:0009651|17486125|IEP go_process response to mannitol stimulus|GO:0010555|17486125|IEP go_process regulation of potassium ion transport|GO:0043266|17486125|IMP go_process cellular response to potassium ion starvation|GO:0051365|17486125|IMP go_function kinase activity|GO:0016301||ISS product CBL-interacting protein kinase 9 note CBL-interacting protein kinase 9 (CIPK9); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: in 6 processes; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 23 (TAIR:AT1G30270.1); Has 130572 Blast hits to 128490 proteins in 4426 species: Archae - 165; Bacteria - 15544; Metazoa - 48044; Fungi - 13206; Plants - 31490; Viruses - 522; Other Eukaryotes - 21601 (source: NCBI BLink). protein_id AT1G01140.3p transcript_id AT1G01140.3 protein_id AT1G01140.3p transcript_id AT1G01140.3 LOCN Exon COOR C/64398-64475,64570-64656,64751-64807,64901-65017,65110-65217,65331-65456,65563-65652,65739-65864,66107-66160,66262-66342,66450-66557,66678-66749,66835-66897,67324-67512

hits since Aug 25, 2007 | T-DNA Express | Transcriptome | RiceGE japonica | RiceGE indica | Methylome | YeastGE |
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